Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
KRT9P35527 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT9P35527 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT9P35527 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT9P35527 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 AL162726.2-201ENST00000438986 1017 ntBASIC16.17■□□□□ 0.18
KRT9P35527 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT9P35527 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT9P35527 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.17■□□□□ 0.18
KRT9P35527 WFDC1-204ENST00000613603 549 ntBASIC16.17■□□□□ 0.18
KRT9P35527 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT9P35527 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KRT9P35527 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT9P35527 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KRT9P35527 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 AL136172.1-201ENST00000598590 1394 ntBASIC16.16■□□□□ 0.18
KRT9P35527 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 AC011840.2-201ENST00000563063 1520 ntBASIC16.16■□□□□ 0.18
KRT9P35527 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
KRT9P35527 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT9P35527 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT9P35527 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT9P35527 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT9P35527 CU634019.7-201ENST00000624153 1185 ntBASIC16.16■□□□□ 0.18
KRT9P35527 FP236241.2-201ENST00000624906 1185 ntBASIC16.16■□□□□ 0.18
KRT9P35527 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT9P35527 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT9P35527 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 AC003102.2-201ENST00000589195 1469 ntBASIC16.16■□□□□ 0.18
KRT9P35527 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT9P35527 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT9P35527 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KRT9P35527 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AC107918.4-201ENST00000641966 3141 ntBASIC16.15■□□□□ 0.18
KRT9P35527 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms