Protein–RNA interactions for Protein: P31941

APOBEC3A, DNA dC->dU-editing enzyme APOBEC-3A, humanhuman

Predicted RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP31941 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.55□□□□□ -0.4
APOBEC3AP31941 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AL353637.1-201ENST00000451571 732 ntBASIC12.55□□□□□ -0.4
APOBEC3AP31941 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AC006122.1-201ENST00000493323 440 ntBASIC12.55□□□□□ -0.4
APOBEC3AP31941 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AC097724.1-201ENST00000609581 426 ntBASIC12.55□□□□□ -0.4
APOBEC3AP31941 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 DBET-201ENST00000630918 3363 ntBASIC12.55□□□□□ -0.4
APOBEC3AP31941 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
APOBEC3AP31941 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
APOBEC3AP31941 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 ACTG1P2-201ENST00000415776 1125 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 ACTG1P11-201ENST00000425411 1125 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 POU5F1P2-201ENST00000521750 823 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 AC103988.2-201ENST00000561804 725 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 AL590440.2-201ENST00000641973 1595 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 AC139712.1-201ENST00000378256 1875 ntBASIC12.54□□□□□ -0.4
APOBEC3AP31941 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
APOBEC3AP31941 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
APOBEC3AP31941 AC018442.1-201ENST00000421439 2061 ntBASIC12.53□□□□□ -0.4
APOBEC3AP31941 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC3AP31941 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC3AP31941 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOBEC3AP31941 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms