Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.58□□□□□ -0.24
SHC1P29353 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.58□□□□□ -0.24
SHC1P29353 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 MBLAC2-202ENST00000514906 1936 ntBASIC13.57□□□□□ -0.24
SHC1P29353 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 OR8S1-201ENST00000310194 1080 ntBASIC13.57□□□□□ -0.24
SHC1P29353 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.57□□□□□ -0.24
SHC1P29353 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 AC245100.3-201ENST00000441281 285 ntBASIC13.57□□□□□ -0.24
SHC1P29353 AC022210.1-201ENST00000449856 793 ntBASIC13.57□□□□□ -0.24
SHC1P29353 IGHV3-71-201ENST00000523324 359 ntBASIC13.57□□□□□ -0.24
SHC1P29353 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 RN7SL48P-201ENST00000579283 293 ntBASIC13.57□□□□□ -0.24
SHC1P29353 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 AC138951.2-201ENST00000623455 1161 ntBASIC13.57□□□□□ -0.24
SHC1P29353 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
SHC1P29353 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 AC005252.3-201ENST00000623855 2258 ntBASIC13.57□□□□□ -0.24
SHC1P29353 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 CLUHP2-201ENST00000426660 1303 ntBASIC13.57□□□□□ -0.24
SHC1P29353 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.57□□□□□ -0.24
SHC1P29353 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
SHC1P29353 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SHC1P29353 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHC1P29353 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHC1P29353 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
SHC1P29353 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 CNN2P8-201ENST00000421872 913 ntBASIC13.56□□□□□ -0.24
SHC1P29353 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SHC1P29353 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 RPL7P3-201ENST00000441388 714 ntBASIC13.56□□□□□ -0.24
SHC1P29353 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.56□□□□□ -0.24
SHC1P29353 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.56□□□□□ -0.24
SHC1P29353 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.56□□□□□ -0.24
SHC1P29353 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 AC132938.4-201ENST00000623835 848 ntBASIC13.56□□□□□ -0.24
SHC1P29353 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms