Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 AC023090.2-201ENST00000625182 2110 ntBASIC13.85□□□□□ -0.19
CHMP24386 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.85□□□□□ -0.19
CHMP24386 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHMP24386 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHMP24386 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.85□□□□□ -0.19
CHMP24386 AC079776.1-201ENST00000401540 1152 ntBASIC13.85□□□□□ -0.19
CHMP24386 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.85□□□□□ -0.19
CHMP24386 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CHMP24386 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.85□□□□□ -0.19
CHMP24386 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 HILS1-202ENST00000545329 423 ntBASIC13.85□□□□□ -0.19
CHMP24386 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.85□□□□□ -0.19
CHMP24386 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHMP24386 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHMP24386 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHMP24386 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.85□□□□□ -0.19
CHMP24386 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHMP24386 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHMP24386 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 AC089987.1-201ENST00000551654 2209 ntBASIC13.84□□□□□ -0.19
CHMP24386 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 AL157414.3-201ENST00000624276 1954 ntBASIC13.84□□□□□ -0.19
CHMP24386 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.84□□□□□ -0.19
CHMP24386 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.84□□□□□ -0.19
CHMP24386 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 AL512343.1-201ENST00000605837 169 ntBASIC13.84□□□□□ -0.19
CHMP24386 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.84□□□□□ -0.19
CHMP24386 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHMP24386 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CHMP24386 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms