Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.56□□□□□ -0.4
BCL3P20749 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 AC106760.1-201ENST00000508690 800 ntBASIC12.56□□□□□ -0.4
BCL3P20749 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.56□□□□□ -0.4
BCL3P20749 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.56□□□□□ -0.4
BCL3P20749 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.56□□□□□ -0.4
BCL3P20749 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.56□□□□□ -0.4
BCL3P20749 AL138709.1-201ENST00000614840 1693 ntBASIC12.56□□□□□ -0.4
BCL3P20749 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.56□□□□□ -0.4
BCL3P20749 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
BCL3P20749 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BCL3P20749 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BCL3P20749 AC016397.2-201ENST00000624848 1985 ntBASIC12.56□□□□□ -0.4
BCL3P20749 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
BCL3P20749 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BCL3P20749 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.56□□□□□ -0.4
BCL3P20749 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BCL3P20749 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BCL3P20749 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
BCL3P20749 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.55□□□□□ -0.4
BCL3P20749 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 FTLP10-202ENST00000505798 471 ntBASIC12.55□□□□□ -0.4
BCL3P20749 AL391280.1-201ENST00000506969 1062 ntBASIC12.55□□□□□ -0.4
BCL3P20749 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 RN7SL48P-201ENST00000579283 293 ntBASIC12.55□□□□□ -0.4
BCL3P20749 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.55□□□□□ -0.4
BCL3P20749 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 AC011498.7-201ENST00000624986 2027 ntBASIC12.55□□□□□ -0.4
BCL3P20749 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BCL3P20749 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.55□□□□□ -0.4
BCL3P20749 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
BCL3P20749 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BCL3P20749 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
BCL3P20749 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms