Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
ATP2B1P20020 FAM197Y7-201ENST00000432892 766 ntBASIC17.06■□□□□ 0.32
ATP2B1P20020 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 AL391280.1-201ENST00000506969 1062 ntBASIC17.06■□□□□ 0.32
ATP2B1P20020 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.06■□□□□ 0.32
ATP2B1P20020 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.06■□□□□ 0.32
ATP2B1P20020 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.06■□□□□ 0.32
ATP2B1P20020 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2B1P20020 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2B1P20020 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2B1P20020 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATP2B1P20020 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATP2B1P20020 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 RN7SKP230-201ENST00000365642 335 ntBASIC17.05■□□□□ 0.32
ATP2B1P20020 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2B1P20020 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2B1P20020 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.05■□□□□ 0.32
ATP2B1P20020 AC007551.1-201ENST00000457394 519 ntBASIC17.05■□□□□ 0.32
ATP2B1P20020 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2B1P20020 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2B1P20020 AC138466.3-201ENST00000619983 221 ntBASIC17.05■□□□□ 0.32
ATP2B1P20020 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ATP2B1P20020 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2B1P20020 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2B1P20020 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 AL138725.1-201ENST00000407347 1314 ntBASIC17.04■□□□□ 0.32
ATP2B1P20020 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 AC016694.1-201ENST00000434179 700 ntBASIC17.04■□□□□ 0.32
ATP2B1P20020 AC022447.6-201ENST00000515522 438 ntBASIC17.04■□□□□ 0.32
ATP2B1P20020 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2B1P20020 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2B1P20020 RN7SL48P-201ENST00000579283 293 ntBASIC17.04■□□□□ 0.32
ATP2B1P20020 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2B1P20020 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2B1P20020 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 AC009093.2-202ENST00000620513 2079 ntBASIC17.04■□□□□ 0.32
ATP2B1P20020 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
ATP2B1P20020 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2B1P20020 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2B1P20020 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms