Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.35□□□□□ -0.27
FREM3P0C091 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
FREM3P0C091 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 CHMP4BP1-201ENST00000556017 588 ntBASIC13.35□□□□□ -0.27
FREM3P0C091 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 AC103810.3-201ENST00000583567 96 ntBASIC13.35□□□□□ -0.27
FREM3P0C091 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
FREM3P0C091 AC005840.4-201ENST00000541242 2494 ntBASIC13.35□□□□□ -0.27
FREM3P0C091 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.35□□□□□ -0.27
FREM3P0C091 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
FREM3P0C091 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
FREM3P0C091 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.35□□□□□ -0.27
FREM3P0C091 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FREM3P0C091 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.35□□□□□ -0.27
FREM3P0C091 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
FREM3P0C091 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 AC016700.1-201ENST00000429424 312 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 KLF2P1-201ENST00000447438 1042 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 SPTLC1P5-201ENST00000450718 252 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 HIST2H2BC-201ENST00000498492 580 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 AC126915.1-201ENST00000522847 1038 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
FREM3P0C091 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
FREM3P0C091 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 EIF4HP1-201ENST00000453115 687 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 AC026434.2-201ENST00000506094 1078 ntBASIC13.34□□□□□ -0.27
FREM3P0C091 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.34□□□□□ -0.27
FREM3P0C091 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.34□□□□□ -0.27
FREM3P0C091 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.34□□□□□ -0.27
FREM3P0C091 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.34□□□□□ -0.27
FREM3P0C091 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.34□□□□□ -0.27
FREM3P0C091 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.34□□□□□ -0.27
FREM3P0C091 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.34□□□□□ -0.27
FREM3P0C091 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FREM3P0C091 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms