Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CU639417.3-201ENST00000624240 1404 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.92□□□□□ -0.34
SFTPBP07988 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SFTPBP07988 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SFTPBP07988 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SFTPBP07988 HSPA7-201ENST00000445535 1927 ntBASIC12.92□□□□□ -0.34
SFTPBP07988 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 AL158070.2-201ENST00000623713 1621 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 AL137783.1-201ENST00000623494 1896 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 FP325330.2-201ENST00000624219 5630 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 CR383656.2-201ENST00000548656 2254 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 AC098614.1-201ENST00000368528 745 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.91□□□□□ -0.34
SFTPBP07988 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.91□□□□□ -0.34
SFTPBP07988 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.91□□□□□ -0.34
SFTPBP07988 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 INE1-201ENST00000456273 945 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SFTPBP07988 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 AC107373.2-201ENST00000607735 490 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SFTPBP07988 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 AL138799.1-201ENST00000448213 1675 ntBASIC12.91□□□□□ -0.34
SFTPBP07988 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SFTPBP07988 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.91□□□□□ -0.34
SFTPBP07988 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SFTPBP07988 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.91□□□□□ -0.34
SFTPBP07988 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SFTPBP07988 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.9□□□□□ -0.34
SFTPBP07988 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.9□□□□□ -0.34
SFTPBP07988 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.9□□□□□ -0.34
SFTPBP07988 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 HLA-K-203ENST00000430151 1046 ntBASIC12.9□□□□□ -0.34
SFTPBP07988 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.9□□□□□ -0.34
SFTPBP07988 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.9□□□□□ -0.34
SFTPBP07988 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.9□□□□□ -0.34
SFTPBP07988 AC104596.2-201ENST00000512793 793 ntBASIC12.9□□□□□ -0.34
SFTPBP07988 AC026410.3-201ENST00000514280 936 ntBASIC12.9□□□□□ -0.34
SFTPBP07988 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.9□□□□□ -0.34
SFTPBP07988 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms