Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CTSBP07858 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CTSBP07858 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CTSBP07858 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 NORAD-201ENST00000565493 5339 ntBASIC13.86□□□□□ -0.19
CTSBP07858 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 AC091046.1-201ENST00000331871 207 ntBASIC13.86□□□□□ -0.19
CTSBP07858 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 AL596276.2-201ENST00000447525 331 ntBASIC13.86□□□□□ -0.19
CTSBP07858 AC073150.1-201ENST00000450406 1084 ntBASIC13.86□□□□□ -0.19
CTSBP07858 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 NUP210P1-202ENST00000504322 710 ntBASIC13.86□□□□□ -0.19
CTSBP07858 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.86□□□□□ -0.19
CTSBP07858 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.86□□□□□ -0.19
CTSBP07858 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CTSBP07858 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 AL390755.1-201ENST00000623716 2027 ntBASIC13.86□□□□□ -0.19
CTSBP07858 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
CTSBP07858 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 AC012617.1-204ENST00000586340 2305 ntBASIC13.86□□□□□ -0.19
CTSBP07858 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 RN7SL832P-201ENST00000607781 1756 ntBASIC13.86□□□□□ -0.19
CTSBP07858 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CTSBP07858 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CTSBP07858 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSBP07858 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSBP07858 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSBP07858 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSBP07858 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSBP07858 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSBP07858 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSBP07858 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSBP07858 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSBP07858 Z97180.1-201ENST00000445173 988 ntBASIC13.85□□□□□ -0.19
CTSBP07858 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms