Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 AC055811.4-201ENST00000624039 1754 ntBASIC14.59□□□□□ -0.07
CAPN1P07384 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN1P07384 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN1P07384 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CAPN1P07384 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN1P07384 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN1P07384 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
CAPN1P07384 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN1P07384 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CAPN1P07384 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CAPN1P07384 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.58□□□□□ -0.08
CAPN1P07384 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.58□□□□□ -0.08
CAPN1P07384 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 AC022494.1-201ENST00000466044 728 ntBASIC14.58□□□□□ -0.08
CAPN1P07384 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.58□□□□□ -0.08
CAPN1P07384 AC022447.6-201ENST00000515522 438 ntBASIC14.58□□□□□ -0.08
CAPN1P07384 RNA5SP412-201ENST00000516234 123 ntBASIC14.58□□□□□ -0.08
CAPN1P07384 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.58□□□□□ -0.08
CAPN1P07384 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CAPN1P07384 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN1P07384 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN1P07384 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CAPN1P07384 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 FAM86MP-201ENST00000340703 885 ntBASIC14.57□□□□□ -0.08
CAPN1P07384 RNU1-114P-201ENST00000365297 166 ntBASIC14.57□□□□□ -0.08
CAPN1P07384 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.57□□□□□ -0.08
CAPN1P07384 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.57□□□□□ -0.08
CAPN1P07384 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN1P07384 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN1P07384 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms