Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV3P03979 AL136172.1-201ENST00000598590 1394 ntBASIC11.66□□□□□ -0.54
TRGV3P03979 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV3P03979 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV3P03979 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
TRGV3P03979 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AL138725.1-201ENST00000407347 1314 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC007191.1-201ENST00000623179 2995 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
TRGV3P03979 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
TRGV3P03979 AC232323.1-201ENST00000540724 2099 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.65□□□□□ -0.54
TRGV3P03979 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.65□□□□□ -0.54
TRGV3P03979 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TRGV3P03979 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.65□□□□□ -0.54
TRGV3P03979 KRT223P-202ENST00000449164 1292 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.65□□□□□ -0.54
TRGV3P03979 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.65□□□□□ -0.54
TRGV3P03979 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.65□□□□□ -0.54
TRGV3P03979 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC106820.3-201ENST00000561653 397 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.65□□□□□ -0.54
TRGV3P03979 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC138696.2-201ENST00000607376 223 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 MIR6775-201ENST00000617557 69 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.65□□□□□ -0.54
TRGV3P03979 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 MTHFR-210ENST00000641407 2387 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC020910.5-201ENST00000623668 1865 ntBASIC11.65□□□□□ -0.54
TRGV3P03979 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.65□□□□□ -0.54
TRGV3P03979 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
TRGV3P03979 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRGV3P03979 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TRGV3P03979 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TRGV3P03979 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TRGV3P03979 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.65□□□□□ -0.55
TRGV3P03979 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
TRGV3P03979 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
TRGV3P03979 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.65□□□□□ -0.55
TRGV3P03979 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
TRGV3P03979 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TRGV3P03979 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
TRGV3P03979 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV3P03979 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV3P03979 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV3P03979 AC022210.1-201ENST00000449856 793 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms