Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-AP01891 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-AP01891 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-AP01891 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
HLA-AP01891 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.52□□□□□ -0.4
HLA-AP01891 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
HLA-AP01891 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 AP3S2-216ENST00000617003 1561 ntBASIC12.52□□□□□ -0.4
HLA-AP01891 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
HLA-AP01891 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HLA-AP01891 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-AP01891 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 RN7SL832P-201ENST00000607781 1756 ntBASIC12.52□□□□□ -0.41
HLA-AP01891 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 AL353705.2-201ENST00000428243 662 ntBASIC12.52□□□□□ -0.41
HLA-AP01891 RBPMS2P1-201ENST00000437762 623 ntBASIC12.52□□□□□ -0.41
HLA-AP01891 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
HLA-AP01891 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-AP01891 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC118758.2-201ENST00000614242 2813 ntBASIC12.52□□□□□ -0.41
HLA-AP01891 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-AP01891 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-AP01891 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-AP01891 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HLA-AP01891 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-AP01891 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-AP01891 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 AL118506.1-201ENST00000601296 3082 ntBASIC12.51□□□□□ -0.41
HLA-AP01891 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-AP01891 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-AP01891 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-AP01891 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-AP01891 AC254562.1-201ENST00000417586 456 ntBASIC12.51□□□□□ -0.41
HLA-AP01891 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-AP01891 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.51□□□□□ -0.41
HLA-AP01891 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-AP01891 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms