Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AL161932.2-201ENST00000435436 679 ntBASIC14.87□□□□□ -0.03
PRAMEF11O60813 VDAC1P1-201ENST00000439229 848 ntBASIC14.87□□□□□ -0.03
PRAMEF11O60813 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AC006122.1-201ENST00000493323 440 ntBASIC14.87□□□□□ -0.03
PRAMEF11O60813 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AL118558.3-201ENST00000607414 1079 ntBASIC14.87□□□□□ -0.03
PRAMEF11O60813 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 AC064801.2-201ENST00000625052 1303 ntBASIC14.87□□□□□ -0.03
PRAMEF11O60813 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF11O60813 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF11O60813 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 CYP4F23P-201ENST00000593402 1579 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC004898.1-201ENST00000451057 766 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 SERPINA13P-202ENST00000478994 924 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 HLA-J-204ENST00000495278 958 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 SCARNA21-201ENST00000517026 139 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC008805.1-201ENST00000590892 364 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 AL022328.3-201ENST00000607943 679 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC133540.1-201ENST00000620845 1019 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC068587.8-201ENST00000641239 219 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC004923.1-202ENST00000642106 209 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 AC139749.1-202ENST00000617529 3139 ntBASIC14.86□□□□□ -0.03
PRAMEF11O60813 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PRAMEF11O60813 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF11O60813 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 FAM90A7P-201ENST00000382628 1395 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 FAM90A23P-201ENST00000400136 1395 ntBASIC14.85□□□□□ -0.03
PRAMEF11O60813 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRAMEF11O60813 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms