Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC005089.1-201ENST00000619486 2241 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC134698.3-201ENST00000523880 214 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 IQSEC3P1-201ENST00000538799 536 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC28A2O43868 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC28A2O43868 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC079336.7-201ENST00000623428 1078 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC28A2O43868 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC006480.2-201ENST00000609770 1337 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 AC007787.1-201ENST00000588095 1583 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 GRK6P1-201ENST00000400595 1711 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC28A2O43868 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC28A2O43868 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.29□□□□□ -0.12
SLC28A2O43868 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC28A2O43868 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
SLC28A2O43868 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC28A2O43868 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SLC28A2O43868 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SLC28A2O43868 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SLC28A2O43868 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC28A2O43868 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
SLC28A2O43868 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms