Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AL391069.4-201ENST00000609583 481 ntBASIC13.65□□□□□ -0.22
IDH3BO43837 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
IDH3BO43837 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
IDH3BO43837 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
IDH3BO43837 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.65□□□□□ -0.22
IDH3BO43837 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.65□□□□□ -0.22
IDH3BO43837 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IDH3BO43837 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.64□□□□□ -0.23
IDH3BO43837 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 MIR193BHG-211ENST00000641433 5365 ntBASIC13.64□□□□□ -0.23
IDH3BO43837 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 AL353779.1-201ENST00000434793 351 ntBASIC13.64□□□□□ -0.23
IDH3BO43837 AC009477.1-201ENST00000452936 217 ntBASIC13.64□□□□□ -0.23
IDH3BO43837 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.64□□□□□ -0.23
IDH3BO43837 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
IDH3BO43837 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.64□□□□□ -0.23
IDH3BO43837 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.64□□□□□ -0.23
IDH3BO43837 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.64□□□□□ -0.23
IDH3BO43837 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.64□□□□□ -0.23
IDH3BO43837 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
IDH3BO43837 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
IDH3BO43837 DRD5P1-201ENST00000456605 1438 ntBASIC13.64□□□□□ -0.23
IDH3BO43837 AC097359.2-201ENST00000604992 2389 ntBASIC13.64□□□□□ -0.23
IDH3BO43837 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IDH3BO43837 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.63□□□□□ -0.23
IDH3BO43837 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.63□□□□□ -0.23
IDH3BO43837 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.63□□□□□ -0.23
IDH3BO43837 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IDH3BO43837 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms