Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CR383656.12-201ENST00000549567 513 ntBASIC15.76■□□□□ 0.11
FOXN3O00409 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXN3O00409 AC005225.4-201ENST00000557330 545 ntBASIC15.76■□□□□ 0.11
FOXN3O00409 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXN3O00409 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.76■□□□□ 0.11
FOXN3O00409 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXN3O00409 MST1P2-201ENST00000457982 2291 ntBASIC15.76■□□□□ 0.11
FOXN3O00409 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 KRT8P4-201ENST00000509735 1454 ntBASIC15.76■□□□□ 0.11
FOXN3O00409 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXN3O00409 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXN3O00409 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXN3O00409 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXN3O00409 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
FOXN3O00409 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
FOXN3O00409 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 KRT43P-201ENST00000434019 910 ntBASIC15.75■□□□□ 0.11
FOXN3O00409 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
FOXN3O00409 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXN3O00409 KRT17P7-201ENST00000451704 1104 ntBASIC15.75■□□□□ 0.11
FOXN3O00409 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXN3O00409 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 AP000812.2-201ENST00000538934 718 ntBASIC15.75■□□□□ 0.11
FOXN3O00409 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 C2orf69P2-201ENST00000562032 1123 ntBASIC15.75■□□□□ 0.11
FOXN3O00409 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXN3O00409 LINC02084-201ENST00000606069 1096 ntBASIC15.75■□□□□ 0.11
FOXN3O00409 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXN3O00409 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXN3O00409 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXN3O00409 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 PDIA3P1-201ENST00000471856 1510 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 AL136309.1-201ENST00000403917 691 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 CHMP1AP1-201ENST00000445563 662 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 CICP12-201ENST00000455801 843 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
FOXN3O00409 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXN3O00409 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXN3O00409 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
FOXN3O00409 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXN3O00409 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXN3O00409 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXN3O00409 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms