Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC1O00299 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.94□□□□□ -0.18
CLIC1O00299 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLIC1O00299 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.94□□□□□ -0.18
CLIC1O00299 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLIC1O00299 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLIC1O00299 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 C8orf49-201ENST00000525043 1968 ntBASIC13.93□□□□□ -0.18
CLIC1O00299 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 RN7SKP230-201ENST00000365642 335 ntBASIC13.93□□□□□ -0.18
CLIC1O00299 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.93□□□□□ -0.18
CLIC1O00299 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 DFFBP1-201ENST00000433250 979 ntBASIC13.93□□□□□ -0.18
CLIC1O00299 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC103988.2-201ENST00000561804 725 ntBASIC13.93□□□□□ -0.18
CLIC1O00299 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.93□□□□□ -0.18
CLIC1O00299 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CLIC1O00299 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.93□□□□□ -0.18
CLIC1O00299 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.93□□□□□ -0.18
CLIC1O00299 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLIC1O00299 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC1O00299 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.92□□□□□ -0.18
CLIC1O00299 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC1O00299 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC1O00299 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC1O00299 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLIC1O00299 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLIC1O00299 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CLIC1O00299 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC1O00299 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC1O00299 MYCLP2-201ENST00000449268 967 ntBASIC13.92□□□□□ -0.18
CLIC1O00299 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC1O00299 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.92□□□□□ -0.18
CLIC1O00299 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.92□□□□□ -0.18
CLIC1O00299 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC1O00299 AP001063.1-201ENST00000568332 529 ntBASIC13.92□□□□□ -0.18
CLIC1O00299 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms