Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
NACAE9PAV3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.9□□□□□ -0.66
NACAE9PAV3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.9□□□□□ -0.66
NACAE9PAV3 BRI3BPP1-201ENST00000594224 787 ntBASIC10.9□□□□□ -0.66
NACAE9PAV3 AC025181.2-201ENST00000606994 802 ntBASIC10.9□□□□□ -0.66
NACAE9PAV3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.9□□□□□ -0.66
NACAE9PAV3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 AC005840.4-201ENST00000541242 2494 ntBASIC10.9□□□□□ -0.66
NACAE9PAV3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.9□□□□□ -0.66
NACAE9PAV3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
NACAE9PAV3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NACAE9PAV3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
NACAE9PAV3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 AL158070.2-201ENST00000623713 1621 ntBASIC10.9□□□□□ -0.67
NACAE9PAV3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
NACAE9PAV3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
NACAE9PAV3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.89□□□□□ -0.67
NACAE9PAV3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC112492.5-201ENST00000421897 457 ntBASIC10.89□□□□□ -0.67
NACAE9PAV3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.89□□□□□ -0.67
NACAE9PAV3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.89□□□□□ -0.67
NACAE9PAV3 TIMM17BP1-201ENST00000545713 516 ntBASIC10.89□□□□□ -0.67
NACAE9PAV3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NACAE9PAV3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.89□□□□□ -0.67
NACAE9PAV3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.89□□□□□ -0.67
NACAE9PAV3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms