Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RNA5SP486-201ENST00000515961 83 ntBASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RN7SL560P-201ENST00000577943 264 ntBASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC055811.4-201ENST00000624039 1754 ntBASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 BEND3P1-201ENST00000421591 1944 ntBASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.92□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL645937.2-201ENST00000396808 931 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ACTBP8-201ENST00000403258 1108 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 MIR1908-201ENST00000410394 80 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC022494.1-201ENST00000466044 728 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC078819.1-201ENST00000547454 765 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC012085.1-201ENST00000548270 765 ntBASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms