Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 RN7SL618P-201ENST00000477850 296 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AL512361.1-201ENST00000554200 418 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AC090643.2-201ENST00000623442 2029 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 AC011498.7-201ENST00000624986 2027 ntBASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRAV18A0A075B6X5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 Z82170.1-201ENST00000625081 3192 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CLK3P2-201ENST00000427566 1453 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AC004945.1-201ENST00000416738 983 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 SPDYE7P-202ENST00000420373 878 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AC004832.2-201ENST00000426397 482 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GAPDHP40-201ENST00000505218 1006 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 SDHAP3-202ENST00000515467 728 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AC051619.7-201ENST00000568314 623 ntBASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms