Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ACTBP11-201ENST00000436287 1126 ntBASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AC005730.2-201ENST00000564549 1184 ntBASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 AC005695.3-201ENST00000614522 232 ntBASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGC4Q9Y5F7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 MYADML-201ENST00000474610 2147 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 KHSRPP1-201ENST00000427983 1768 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 FAM86MP-201ENST00000340703 885 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 MIR663B-201ENST00000408361 115 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AL035414.1-201ENST00000451327 857 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AC100827.2-201ENST00000563214 1194 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AC132192.2-201ENST00000596206 1147 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 AC244394.1-201ENST00000435000 1665 ntBASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGC4Q9Y5F7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGC4Q9Y5F7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms