Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RHBDD3Q9Y3P4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC010327.5-201ENST00000586923 3061 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 TERF1P3-201ENST00000505638 1227 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC022616.1-201ENST00000518688 554 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ENPP7P5-201ENST00000541031 1031 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 WASH4P-201ENST00000564273 1246 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC140912.1-201ENST00000577171 1054 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 WFDC1-204ENST00000613603 549 ntBASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.98□□□□□ -0.33
RHBDD3Q9Y3P4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AC090505.1-201ENST00000430515 1834 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 AL359881.3-201ENST00000602640 1721 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 DUX4L47-201ENST00000566374 394 ntBASIC12.97□□□□□ -0.33
RHBDD3Q9Y3P4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms