Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MYADML-201ENST00000474610 2147 ntBASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AC000095.1-201ENST00000603208 874 ntBASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AL035456.1-201ENST00000456064 1369 ntBASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 CLK3P2-201ENST00000427566 1453 ntBASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 HSPA8P5-201ENST00000456928 2069 ntBASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.12□□□□□ -0.47
RCL1Q9Y2P8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AC215219.1-201ENST00000400706 1817 ntBASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 RPL13AP23-201ENST00000480739 586 ntBASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 FP325330.2-201ENST00000624219 5630 ntBASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 AC011498.7-201ENST00000624986 2027 ntBASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RCL1Q9Y2P8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 AGAP10P-201ENST00000454844 2418 ntBASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RCL1Q9Y2P8 YBX2P1-201ENST00000394192 760 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms