Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 AC005077.2-201ENST00000449786 690 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 IGHJ2P-201ENST00000454480 60 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SERPINA13P-202ENST00000478994 924 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 AC021723.1-201ENST00000486306 515 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ACTG1P17-201ENST00000558391 1119 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 AC005089.1-201ENST00000619486 2241 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 AL137783.1-201ENST00000623494 1896 ntBASIC14.74□□□□□ -0.05
SPASTQ9UBP0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.74□□□□□ -0.05
SPASTQ9UBP0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 LINC00528-201ENST00000600723 2160 ntBASIC14.73□□□□□ -0.05
SPASTQ9UBP0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.73□□□□□ -0.05
SPASTQ9UBP0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 NDUFV2P1-201ENST00000596415 907 ntBASIC14.73□□□□□ -0.05
SPASTQ9UBP0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 AC138649.2-201ENST00000615886 705 ntBASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 MROH4P-201ENST00000431302 1578 ntBASIC14.73□□□□□ -0.05
SPASTQ9UBP0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.73□□□□□ -0.05
SPASTQ9UBP0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms