Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ANKRD19P-201ENST00000338192 862 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AL139094.1-201ENST00000405549 1188 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AP005482.1-201ENST00000563722 1273 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 RPSAP52-203ENST00000622976 1023 ntBASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FOXP3Q9BZS1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 RPL13AP25-201ENST00000484130 612 ntBASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC092658.1-201ENST00000505836 891 ntBASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC022616.1-201ENST00000518688 554 ntBASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms