Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 AC117489.1-201ENST00000625169 3217 ntBASIC14.37□□□□□ -0.11
PKP4Q99569 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 HIST2H2BB-201ENST00000449108 381 ntBASIC14.37□□□□□ -0.11
PKP4Q99569 KRT223P-202ENST00000449164 1292 ntBASIC14.37□□□□□ -0.11
PKP4Q99569 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.37□□□□□ -0.11
PKP4Q99569 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.37□□□□□ -0.11
PKP4Q99569 MIR6805-201ENST00000615055 62 ntBASIC14.37□□□□□ -0.11
PKP4Q99569 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.37□□□□□ -0.11
PKP4Q99569 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PKP4Q99569 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
PKP4Q99569 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PKP4Q99569 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 AL590440.2-201ENST00000641973 1595 ntBASIC14.36□□□□□ -0.11
PKP4Q99569 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.36□□□□□ -0.11
PKP4Q99569 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.36□□□□□ -0.11
PKP4Q99569 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.36□□□□□ -0.11
PKP4Q99569 AL136301.1-201ENST00000615830 422 ntBASIC14.36□□□□□ -0.11
PKP4Q99569 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.36□□□□□ -0.11
PKP4Q99569 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.36□□□□□ -0.11
PKP4Q99569 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PKP4Q99569 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PKP4Q99569 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PKP4Q99569 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PKP4Q99569 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PKP4Q99569 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms