Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GRAMD1AQ96CP6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AC134915.1-201ENST00000426461 574 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 BNIP3P42-201ENST00000454982 569 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 BNIP3P29-201ENST00000598302 571 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AC011447.5-201ENST00000616168 564 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 MIR6869-201ENST00000619434 62 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AL645728.2-202ENST00000641679 227 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 PDIA3P1-201ENST00000471856 1510 ntBASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GRAMD1AQ96CP6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 ANKRD19P-201ENST00000338192 862 ntBASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SOCS2P1-201ENST00000417727 557 ntBASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 RPL7P3-201ENST00000441388 714 ntBASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GRAMD1AQ96CP6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms