Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP4CQ96CF2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CHMP4CQ96CF2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4CQ96CF2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP4CQ96CF2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 GRK6P1-201ENST00000400595 1711 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC245100.3-201ENST00000441281 285 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 HOMER2P2-201ENST00000451621 847 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC079316.1-201ENST00000548397 411 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 MIR4683-201ENST00000579659 81 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 MIR4525-201ENST00000580000 75 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AL118558.3-201ENST00000607414 1079 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC005912.2-201ENST00000619492 2400 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC015802.1-201ENST00000588104 1449 ntBASIC17.64■□□□□ 0.41
CHMP4CQ96CF2 AC009093.2-202ENST00000620513 2079 ntBASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 GOLGA2P4-201ENST00000441462 777 ntBASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 COX5BP1-201ENST00000507622 393 ntBASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 RN7SL48P-201ENST00000579283 293 ntBASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 AC243960.2-201ENST00000600996 747 ntBASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP4CQ96CF2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP4CQ96CF2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms