Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 AL160314.3-201ENST00000556041 767 ntBASIC15.82■□□□□ 0.12
BEST2Q8NFU1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 OR2I1P-210ENST00000642037 4691 ntBASIC15.82■□□□□ 0.12
BEST2Q8NFU1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
BEST2Q8NFU1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 VDAC1P1-201ENST00000439229 848 ntBASIC15.81■□□□□ 0.12
BEST2Q8NFU1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 HLA-J-204ENST00000495278 958 ntBASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SCARNA21-201ENST00000517026 139 ntBASIC15.81■□□□□ 0.12
BEST2Q8NFU1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST2Q8NFU1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AC144522.1-201ENST00000625111 1658 ntBASIC15.8■□□□□ 0.12
BEST2Q8NFU1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms