Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AL451007.2-201ENST00000632004 563 ntBASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AL138725.1-201ENST00000407347 1314 ntBASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
OTOP1Q7RTM1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
OTOP1Q7RTM1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
OTOP1Q7RTM1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.89■□□□□ 0.3
OTOP1Q7RTM1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.89■□□□□ 0.3
OTOP1Q7RTM1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
OTOP1Q7RTM1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AC003102.2-201ENST00000589195 1469 ntBASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AL357373.1-201ENST00000394974 322 ntBASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AL157407.1-201ENST00000435784 904 ntBASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AC093909.3-201ENST00000504783 336 ntBASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 MME-218ENST00000625667 363 ntTSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
OTOP1Q7RTM1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 HLA-DMA-203ENST00000395305 777 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AQP7P5-201ENST00000428759 1049 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AQP7P4-201ENST00000447083 1042 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AQP7P2-201ENST00000453967 1041 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 FAM86B3P-203ENST00000523992 854 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AC027139.1-201ENST00000565286 951 ntBASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.88■□□□□ 0.29
OTOP1Q7RTM1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms