Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATPAF1Q5TC12 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PEG13-201ENST00000631594 5667 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AC098614.1-201ENST00000368528 745 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AC107373.2-201ENST00000607735 490 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AL358472.5-202ENST00000641448 1267 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AC007787.1-201ENST00000588095 1583 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 AL138799.1-201ENST00000448213 1675 ntBASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATPAF1Q5TC12 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AC130686.1-201ENST00000622936 2466 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATPAF1Q5TC12 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms