Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMBIM7P-202ENST00000641474 1516 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 AL136379.1-201ENST00000623471 2642 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 AC007274.2-201ENST00000421675 662 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 AC092451.2-201ENST00000538746 658 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 AC103988.2-201ENST00000561804 725 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 AC133540.1-201ENST00000620845 1019 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 AC079336.7-201ENST00000623428 1078 ntBASIC15.63■□□□□ 0.09
VARS2Q5ST30 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.63■□□□□ 0.09
VARS2Q5ST30 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VARS2Q5ST30 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 KRT8P28-201ENST00000433288 1390 ntBASIC15.62■□□□□ 0.09
VARS2Q5ST30 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 PDIA3P2-201ENST00000428073 158 ntBASIC15.62■□□□□ 0.09
VARS2Q5ST30 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MIR3907-201ENST00000579424 151 ntBASIC15.62■□□□□ 0.09
VARS2Q5ST30 AC020922.3-201ENST00000595064 547 ntBASIC15.62■□□□□ 0.09
VARS2Q5ST30 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AL157813.1-201ENST00000612996 587 ntBASIC15.62■□□□□ 0.09
VARS2Q5ST30 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARS2Q5ST30 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.62■□□□□ 0.09
VARS2Q5ST30 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARS2Q5ST30 AC144831.1-201ENST00000573312 2656 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms