Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 AL590440.2-201ENST00000641973 1595 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
EFNB3Q15768 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 AL662890.1-201ENST00000396818 632 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 AL645933.1-201ENST00000440087 609 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 IGHJ2P-201ENST00000454480 60 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB3Q15768 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB3Q15768 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB3Q15768 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB3Q15768 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.56□□□□□ -0.4
EFNB3Q15768 AC138627.1-207ENST00000641560 1006 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
EFNB3Q15768 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB3Q15768 FAM90A7P-201ENST00000382628 1395 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 FAM90A23P-201ENST00000400136 1395 ntBASIC12.56□□□□□ -0.4
EFNB3Q15768 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB3Q15768 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 AC009093.10-201ENST00000641956 1442 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
EFNB3Q15768 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
EFNB3Q15768 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 CYP46A4P-201ENST00000414953 267 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 SPTLC1P5-201ENST00000450718 252 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.55□□□□□ -0.4
EFNB3Q15768 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 AC009779.1-201ENST00000551138 283 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 AL160314.3-201ENST00000556041 767 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 AC005962.1-201ENST00000584100 773 ntBASIC12.55□□□□□ -0.4
EFNB3Q15768 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB3Q15768 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
EFNB3Q15768 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB3Q15768 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms