Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
AP3S2P59780 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S2P59780 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S2P59780 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.71□□□□□ -0.37
AP3S2P59780 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
AP3S2P59780 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.71□□□□□ -0.37
AP3S2P59780 RARRES2P9-201ENST00000565168 469 ntBASIC12.71□□□□□ -0.37
AP3S2P59780 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.71□□□□□ -0.37
AP3S2P59780 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.71□□□□□ -0.37
AP3S2P59780 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 AL137783.1-201ENST00000623494 1896 ntBASIC12.71□□□□□ -0.37
AP3S2P59780 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AP3S2P59780 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.71□□□□□ -0.38
AP3S2P59780 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S2P59780 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S2P59780 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S2P59780 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.71□□□□□ -0.38
AP3S2P59780 HSPA8P5-201ENST00000456928 2069 ntBASIC12.71□□□□□ -0.38
AP3S2P59780 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AP3S2P59780 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.71□□□□□ -0.38
AP3S2P59780 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S2P59780 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.7□□□□□ -0.38
AP3S2P59780 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
AP3S2P59780 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AP3S2P59780 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S2P59780 HCG4P8-203ENST00000443049 980 ntBASIC12.7□□□□□ -0.38
AP3S2P59780 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S2P59780 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.7□□□□□ -0.38
AP3S2P59780 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.7□□□□□ -0.38
AP3S2P59780 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 AC105021.1-202ENST00000570572 669 ntBASIC12.7□□□□□ -0.38
AP3S2P59780 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.7□□□□□ -0.38
AP3S2P59780 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms