Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
RIPK4P57078 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
RIPK4P57078 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 AC106794.1-201ENST00000506935 792 ntBASIC19.21■□□□□ 0.67
RIPK4P57078 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.21■□□□□ 0.67
RIPK4P57078 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.21■□□□□ 0.67
RIPK4P57078 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 AC020914.3-201ENST00000594712 304 ntBASIC19.21■□□□□ 0.67
RIPK4P57078 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.21■□□□□ 0.67
RIPK4P57078 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.21■□□□□ 0.67
RIPK4P57078 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIPK4P57078 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.2■□□□□ 0.66
RIPK4P57078 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RIPK4P57078 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.2■□□□□ 0.66
RIPK4P57078 EIF4HP1-201ENST00000453115 687 ntBASIC19.2■□□□□ 0.66
RIPK4P57078 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 HIST2H2BC-201ENST00000498492 580 ntBASIC19.2■□□□□ 0.66
RIPK4P57078 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 AC138028.6-201ENST00000616106 1482 ntBASIC19.2■□□□□ 0.66
RIPK4P57078 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.2■□□□□ 0.66
RIPK4P57078 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RIPK4P57078 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIPK4P57078 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.19■□□□□ 0.66
RIPK4P57078 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RIPK4P57078 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIPK4P57078 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.19■□□□□ 0.66
RIPK4P57078 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms