Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNA3P52797 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 AC090164.2-201ENST00000611487 516 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNA3P52797 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 AC244452.3-201ENST00000636814 210 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 AC139712.1-201ENST00000378256 1875 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNA3P52797 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.77□□□□□ -0.21
EFNA3P52797 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
EFNA3P52797 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ACTG1P2-201ENST00000415776 1125 ntBASIC13.77□□□□□ -0.21
EFNA3P52797 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ACTG1P11-201ENST00000425411 1125 ntBASIC13.77□□□□□ -0.21
EFNA3P52797 SPTLC1P5-201ENST00000450718 252 ntBASIC13.77□□□□□ -0.21
EFNA3P52797 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.77□□□□□ -0.21
EFNA3P52797 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 TUBBP5-203ENST00000508529 1334 ntBASIC13.77□□□□□ -0.21
EFNA3P52797 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNA3P52797 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.77□□□□□ -0.21
EFNA3P52797 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.77□□□□□ -0.21
EFNA3P52797 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
EFNA3P52797 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNA3P52797 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 KHSRPP1-201ENST00000427983 1768 ntBASIC13.76□□□□□ -0.21
EFNA3P52797 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms