Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.06□□□□□ -0.32
CCR9P51686 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.06□□□□□ -0.32
CCR9P51686 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCR9P51686 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCR9P51686 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCR9P51686 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 AC003102.2-201ENST00000589195 1469 ntBASIC13.05□□□□□ -0.32
CCR9P51686 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 AC215219.1-201ENST00000400706 1817 ntBASIC13.05□□□□□ -0.32
CCR9P51686 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CCR9P51686 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.05□□□□□ -0.32
CCR9P51686 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.05□□□□□ -0.32
CCR9P51686 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.05□□□□□ -0.32
CCR9P51686 AC008738.7-201ENST00000609744 511 ntBASIC13.05□□□□□ -0.32
CCR9P51686 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.05□□□□□ -0.32
CCR9P51686 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.05□□□□□ -0.32
CCR9P51686 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CCR9P51686 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.05□□□□□ -0.32
CCR9P51686 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.05□□□□□ -0.32
CCR9P51686 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCR9P51686 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.04□□□□□ -0.32
CCR9P51686 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 AC022144.1-201ENST00000602255 1580 ntBASIC13.04□□□□□ -0.32
CCR9P51686 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCR9P51686 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.04□□□□□ -0.32
CCR9P51686 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 AC134915.1-201ENST00000426461 574 ntBASIC13.04□□□□□ -0.32
CCR9P51686 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.04□□□□□ -0.32
CCR9P51686 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.04□□□□□ -0.32
CCR9P51686 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.04□□□□□ -0.32
CCR9P51686 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 IGHV3-42-201ENST00000520410 361 ntBASIC13.04□□□□□ -0.32
CCR9P51686 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.04□□□□□ -0.32
CCR9P51686 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 AC120045.2-201ENST00000567334 178 ntBASIC13.04□□□□□ -0.32
CCR9P51686 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.04□□□□□ -0.32
CCR9P51686 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CCR9P51686 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.04□□□□□ -0.32
CCR9P51686 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.04□□□□□ -0.32
CCR9P51686 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CCR9P51686 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 INTS4P2-202ENST00000614726 2019 ntBASIC13.04□□□□□ -0.32
CCR9P51686 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 MRPL37P1-201ENST00000592451 1337 ntBASIC13.04□□□□□ -0.32
CCR9P51686 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CCR9P51686 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 AL136172.1-201ENST00000598590 1394 ntBASIC13.04□□□□□ -0.32
CCR9P51686 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCR9P51686 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms