Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CDC34P49427 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 TIMM8BP1-201ENST00000452384 211 ntBASIC11.73□□□□□ -0.53
CDC34P49427 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.73□□□□□ -0.53
CDC34P49427 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
CDC34P49427 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
CDC34P49427 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.73□□□□□ -0.53
CDC34P49427 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 AC034105.1-201ENST00000563488 319 ntBASIC11.73□□□□□ -0.53
CDC34P49427 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
CDC34P49427 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.73□□□□□ -0.53
CDC34P49427 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 AL137783.1-201ENST00000623494 1896 ntBASIC11.73□□□□□ -0.53
CDC34P49427 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
CDC34P49427 AC084121.4-201ENST00000641598 221 ntBASIC11.73□□□□□ -0.53
CDC34P49427 AF228730.8-201ENST00000642140 221 ntBASIC11.73□□□□□ -0.53
CDC34P49427 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 PTPRVP-205ENST00000641549 5067 ntBASIC11.73□□□□□ -0.53
CDC34P49427 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 AC019294.4-201ENST00000561777 2905 ntBASIC11.73□□□□□ -0.53
CDC34P49427 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CDC34P49427 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CDC34P49427 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.73□□□□□ -0.53
CDC34P49427 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 AC068760.1-201ENST00000493579 1953 ntBASIC11.72□□□□□ -0.53
CDC34P49427 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CDC34P49427 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.72□□□□□ -0.53
CDC34P49427 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.72□□□□□ -0.53
CDC34P49427 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CDC34P49427 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC34P49427 AC145285.3-201ENST00000564603 959 ntBASIC11.72□□□□□ -0.53
CDC34P49427 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC34P49427 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms