Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 AC018629.1-201ENST00000623381 1736 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 OR2R1P-201ENST00000441404 914 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 RN7SL11P-201ENST00000471305 293 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.9□□□□□ -0.18
GABRA4P48169 AL161670.2-201ENST00000557650 1227 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.9□□□□□ -0.18
GABRA4P48169 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.9□□□□□ -0.18
GABRA4P48169 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
GABRA4P48169 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 AC092299.1-201ENST00000632679 757 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.9□□□□□ -0.18
GABRA4P48169 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 CICP24-201ENST00000605464 2705 ntBASIC13.9□□□□□ -0.18
GABRA4P48169 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.9□□□□□ -0.18
GABRA4P48169 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GABRA4P48169 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GABRA4P48169 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GABRA4P48169 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GABRA4P48169 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 AC067930.6-201ENST00000623257 4947 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.89□□□□□ -0.19
GABRA4P48169 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.89□□□□□ -0.19
GABRA4P48169 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 AL662890.1-201ENST00000396818 632 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 ISCA2P1-201ENST00000425548 448 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.89□□□□□ -0.19
GABRA4P48169 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.89□□□□□ -0.19
GABRA4P48169 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 AC097724.1-201ENST00000609581 426 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 AF254983.2-201ENST00000612331 135 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.89□□□□□ -0.19
GABRA4P48169 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.89□□□□□ -0.19
GABRA4P48169 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
GABRA4P48169 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GABRA4P48169 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
GABRA4P48169 AL365209.1-201ENST00000624418 6473 ntBASIC13.88□□□□□ -0.19
GABRA4P48169 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
GABRA4P48169 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
GABRA4P48169 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms