Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 AL645933.1-201ENST00000440087 609 ntBASIC14.64□□□□□ -0.07
HMGCLP35914 AC012441.2-201ENST00000444843 739 ntBASIC14.64□□□□□ -0.07
HMGCLP35914 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.64□□□□□ -0.07
HMGCLP35914 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.64□□□□□ -0.07
HMGCLP35914 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.64□□□□□ -0.07
HMGCLP35914 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 AL033527.4-201ENST00000641026 673 ntBASIC14.64□□□□□ -0.07
HMGCLP35914 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGCLP35914 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HMGCLP35914 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGCLP35914 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGCLP35914 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 CICP4-201ENST00000447359 2812 ntBASIC14.63□□□□□ -0.07
HMGCLP35914 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.63□□□□□ -0.07
HMGCLP35914 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGCLP35914 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 AC009884.2-201ENST00000603110 324 ntBASIC14.63□□□□□ -0.07
HMGCLP35914 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 AL096828.3-201ENST00000615354 462 ntBASIC14.63□□□□□ -0.07
HMGCLP35914 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HMGCLP35914 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGCLP35914 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGCLP35914 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGCLP35914 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 TMBIM7P-202ENST00000641474 1516 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms