Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT9P35527 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.2■□□□□ 0.18
KRT9P35527 AC026434.2-201ENST00000506094 1078 ntBASIC16.2■□□□□ 0.18
KRT9P35527 ENPP7P5-201ENST00000541031 1031 ntBASIC16.2■□□□□ 0.18
KRT9P35527 CTBP2P3-201ENST00000585629 1255 ntBASIC16.2■□□□□ 0.18
KRT9P35527 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.2■□□□□ 0.18
KRT9P35527 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KRT9P35527 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT9P35527 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT9P35527 CICP17-201ENST00000418553 2377 ntBASIC16.2■□□□□ 0.18
KRT9P35527 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT9P35527 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT9P35527 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
KRT9P35527 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.19■□□□□ 0.18
KRT9P35527 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 SALL4P5-201ENST00000419001 1760 ntBASIC16.19■□□□□ 0.18
KRT9P35527 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
KRT9P35527 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
KRT9P35527 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT9P35527 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 AC092364.2-202ENST00000597012 1073 ntBASIC16.19■□□□□ 0.18
KRT9P35527 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT9P35527 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT9P35527 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT9P35527 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT9P35527 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT9P35527 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 HMGN1P19-201ENST00000436976 333 ntBASIC16.18■□□□□ 0.18
KRT9P35527 AC114812.1-204ENST00000449669 728 ntBASIC16.18■□□□□ 0.18
KRT9P35527 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 AC022616.1-201ENST00000518688 554 ntBASIC16.18■□□□□ 0.18
KRT9P35527 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
KRT9P35527 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT9P35527 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.18■□□□□ 0.18
KRT9P35527 TP53TG3HP-202ENST00000569755 579 ntBASIC16.18■□□□□ 0.18
KRT9P35527 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT9P35527 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT9P35527 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT9P35527 AC005252.3-201ENST00000623855 2258 ntBASIC16.18■□□□□ 0.18
KRT9P35527 AL137784.3-201ENST00000623858 2288 ntBASIC16.18■□□□□ 0.18
KRT9P35527 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT9P35527 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 TCAM1P-207ENST00000485295 1537 ntBASIC16.18■□□□□ 0.18
KRT9P35527 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT9P35527 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms