Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.76□□□□□ -0.21
GABRA3P34903 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.76□□□□□ -0.21
GABRA3P34903 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 LINC01230-201ENST00000625222 3017 ntBASIC13.76□□□□□ -0.21
GABRA3P34903 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GABRA3P34903 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
GABRA3P34903 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 PDIA3P1-201ENST00000471856 1510 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.75□□□□□ -0.21
GABRA3P34903 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 ARSEP1-201ENST00000420443 635 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.75□□□□□ -0.21
GABRA3P34903 AC234783.1-201ENST00000441761 496 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.75□□□□□ -0.21
GABRA3P34903 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 COX5BP1-201ENST00000507622 393 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 AP003171.2-201ENST00000528208 925 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 AL162274.1-201ENST00000617191 1098 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 AL035252.4-201ENST00000624174 288 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GABRA3P34903 MYADML-201ENST00000474610 2147 ntBASIC13.75□□□□□ -0.21
GABRA3P34903 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.75□□□□□ -0.21
GABRA3P34903 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GABRA3P34903 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 BOLA2P3-201ENST00000404566 256 ntBASIC13.74□□□□□ -0.21
GABRA3P34903 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.74□□□□□ -0.21
GABRA3P34903 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.74□□□□□ -0.21
GABRA3P34903 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 RPL7P3-201ENST00000441388 714 ntBASIC13.74□□□□□ -0.21
GABRA3P34903 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.74□□□□□ -0.21
GABRA3P34903 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.74□□□□□ -0.21
GABRA3P34903 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.74□□□□□ -0.21
GABRA3P34903 AP000812.2-201ENST00000538934 718 ntBASIC13.74□□□□□ -0.21
GABRA3P34903 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GABRA3P34903 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GABRA3P34903 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms