Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 AC016397.2-201ENST00000624848 1985 ntBASIC13.82□□□□□ -0.2
NR4A1P22736 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.82□□□□□ -0.2
NR4A1P22736 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 RN7SL618P-201ENST00000477850 296 ntBASIC13.82□□□□□ -0.2
NR4A1P22736 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.82□□□□□ -0.2
NR4A1P22736 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.82□□□□□ -0.2
NR4A1P22736 AC092364.2-202ENST00000597012 1073 ntBASIC13.82□□□□□ -0.2
NR4A1P22736 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
NR4A1P22736 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 AC022144.1-201ENST00000602255 1580 ntBASIC13.82□□□□□ -0.2
NR4A1P22736 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.82□□□□□ -0.2
NR4A1P22736 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.82□□□□□ -0.2
NR4A1P22736 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NR4A1P22736 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 KRT8P37-201ENST00000451609 1420 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.81□□□□□ -0.2
NR4A1P22736 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NR4A1P22736 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 RPL5P21-201ENST00000404620 815 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 EEF1DP4-201ENST00000446006 880 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 AC009477.1-201ENST00000452936 217 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 PHKG1P2-201ENST00000457537 863 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.81□□□□□ -0.2
NR4A1P22736 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 ZNF890P-202ENST00000530367 1156 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.81□□□□□ -0.2
NR4A1P22736 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.81□□□□□ -0.2
NR4A1P22736 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.81□□□□□ -0.2
NR4A1P22736 AL844908.2-201ENST00000609461 460 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.81□□□□□ -0.2
NR4A1P22736 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms