Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.4□□□□□ -0.43
CXCL3P19876 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL3P19876 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL3P19876 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 KRT8P14-201ENST00000414254 1442 ntBASIC12.39□□□□□ -0.43
CXCL3P19876 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.39□□□□□ -0.43
CXCL3P19876 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 AC142381.1-201ENST00000426099 345 ntBASIC12.39□□□□□ -0.43
CXCL3P19876 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.39□□□□□ -0.43
CXCL3P19876 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.39□□□□□ -0.43
CXCL3P19876 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 MIR6074-201ENST00000612054 107 ntBASIC12.39□□□□□ -0.43
CXCL3P19876 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.39□□□□□ -0.43
CXCL3P19876 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 MARK2P9-201ENST00000430958 1727 ntBASIC12.39□□□□□ -0.43
CXCL3P19876 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CXCL3P19876 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CXCL3P19876 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 FAM90A11P-201ENST00000518378 2218 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 HIST3H2BA-201ENST00000436555 524 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 AC079781.3-201ENST00000449110 356 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 AL773604.1-201ENST00000617417 272 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 AL031008.1-201ENST00000619963 541 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CXCL3P19876 AC026271.4-201ENST00000578214 1833 ntBASIC12.38□□□□□ -0.43
CXCL3P19876 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.38□□□□□ -0.43
CXCL3P19876 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CXCL3P19876 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CXCL3P19876 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms