Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC11.88□□□□□ -0.51
ACANP16112 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
ACANP16112 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC11.88□□□□□ -0.51
ACANP16112 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 NFIC-211ENST00000641145 8399 ntBASIC11.88□□□□□ -0.51
ACANP16112 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC11.88□□□□□ -0.51
ACANP16112 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ACANP16112 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC11.88□□□□□ -0.51
ACANP16112 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC11.88□□□□□ -0.51
ACANP16112 RN7SL288P-201ENST00000490496 291 ntBASIC11.88□□□□□ -0.51
ACANP16112 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.88□□□□□ -0.51
ACANP16112 AC131206.1-201ENST00000538078 1211 ntBASIC11.88□□□□□ -0.51
ACANP16112 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.88□□□□□ -0.51
ACANP16112 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 AC008741.2-201ENST00000612792 3115 ntBASIC11.88□□□□□ -0.51
ACANP16112 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.88□□□□□ -0.51
ACANP16112 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ACANP16112 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 TEKT4P2-202ENST00000559466 1312 ntBASIC11.87□□□□□ -0.51
ACANP16112 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 CFL1P6-201ENST00000400899 494 ntBASIC11.87□□□□□ -0.51
ACANP16112 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC11.87□□□□□ -0.51
ACANP16112 CDK4P1-201ENST00000454213 828 ntBASIC11.87□□□□□ -0.51
ACANP16112 TPT1P6-201ENST00000458298 514 ntBASIC11.87□□□□□ -0.51
ACANP16112 CASP3-205ENST00000517513 964 ntTSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC11.87□□□□□ -0.51
ACANP16112 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 AL512599.1-201ENST00000430724 685 ntBASIC11.87□□□□□ -0.51
ACANP16112 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.87□□□□□ -0.51
ACANP16112 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC11.87□□□□□ -0.51
ACANP16112 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 CICP12-201ENST00000455801 843 ntBASIC11.87□□□□□ -0.51
ACANP16112 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 RN7SL277P-201ENST00000481521 288 ntBASIC11.87□□□□□ -0.51
ACANP16112 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC11.87□□□□□ -0.51
ACANP16112 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC11.87□□□□□ -0.51
ACANP16112 RNA5SP406-201ENST00000516106 112 ntBASIC11.87□□□□□ -0.51
ACANP16112 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ACANP16112 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ACANP16112 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.87□□□□□ -0.51
ACANP16112 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.87□□□□□ -0.51
ACANP16112 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms