Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AL353729.2-201ENST00000605859 1249 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AC084346.2-201ENST00000607097 949 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 PTENP1-202ENST00000532280 3996 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AC013726.1-201ENST00000563747 2285 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 CICP23-201ENST00000605013 2741 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNYL3P0C7X3 AC138969.2-201ENST00000532739 9932 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AL137784.3-201ENST00000623858 2288 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 LINC00528-201ENST00000600723 2160 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 MROH4P-201ENST00000431302 1578 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 CALR4P-201ENST00000431943 946 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 KRT8P2-201ENST00000556193 944 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AC020914.3-201ENST00000594712 304 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AC005695.3-201ENST00000614522 232 ntBASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNYL3P0C7X3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNYL3P0C7X3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms