Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYP3A4P08684 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.43■□□□□ 0.22
CYP3A4P08684 MIR769-201ENST00000390225 118 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 ACTG1P2-201ENST00000415776 1125 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.43■□□□□ 0.22
CYP3A4P08684 ACTG1P11-201ENST00000425411 1125 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.43■□□□□ 0.22
CYP3A4P08684 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.43■□□□□ 0.22
CYP3A4P08684 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.43■□□□□ 0.22
CYP3A4P08684 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.43■□□□□ 0.22
CYP3A4P08684 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYP3A4P08684 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.43■□□□□ 0.22
CYP3A4P08684 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.43■□□□□ 0.22
CYP3A4P08684 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CYP3A4P08684 AC021016.3-201ENST00000608367 477 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 AC091544.8-201ENST00000619490 361 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 AL591471.1-201ENST00000621855 229 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.43■□□□□ 0.22
CYP3A4P08684 NAP1L6-202ENST00000641404 1222 ntBASIC16.43■□□□□ 0.22
CYP3A4P08684 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CYP3A4P08684 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CYP3A4P08684 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CYP3A4P08684 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYP3A4P08684 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CYP3A4P08684 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.42■□□□□ 0.22
CYP3A4P08684 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.42■□□□□ 0.22
CYP3A4P08684 AC008132.1-202ENST00000342005 1389 ntBASIC16.42■□□□□ 0.22
CYP3A4P08684 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CYP3A4P08684 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 AC099063.4-201ENST00000641099 1602 ntBASIC16.42■□□□□ 0.22
CYP3A4P08684 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.42■□□□□ 0.22
CYP3A4P08684 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 AL161670.2-201ENST00000557650 1227 ntBASIC16.42■□□□□ 0.22
CYP3A4P08684 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.42■□□□□ 0.22
CYP3A4P08684 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CYP3A4P08684 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.42■□□□□ 0.22
CYP3A4P08684 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYP3A4P08684 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CYP3A4P08684 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.42■□□□□ 0.22
CYP3A4P08684 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 AC239868.1-201ENST00000369385 493 ntBASIC16.41■□□□□ 0.22
CYP3A4P08684 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 TSPY25P-201ENST00000429463 745 ntBASIC16.41■□□□□ 0.22
CYP3A4P08684 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.41■□□□□ 0.22
CYP3A4P08684 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.41■□□□□ 0.22
CYP3A4P08684 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CYP3A4P08684 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.41■□□□□ 0.22
CYP3A4P08684 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 AP002353.1-201ENST00000528257 1599 ntBASIC16.41■□□□□ 0.22
CYP3A4P08684 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.41■□□□□ 0.22
CYP3A4P08684 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.41■□□□□ 0.22
CYP3A4P08684 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CYP3A4P08684 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYP3A4P08684 BX640514.1-201ENST00000583223 1918 ntBASIC16.41■□□□□ 0.22
CYP3A4P08684 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms