Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC18.82■□□□□ 0.6
COL5A2P05997 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 AP000354.1-201ENST00000396982 456 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 VENTXP4-201ENST00000449029 958 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.81■□□□□ 0.6
COL5A2P05997 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 RN7SL128P-201ENST00000467883 305 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 AC093300.1-201ENST00000510368 1201 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 AC018846.1-201ENST00000568231 183 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC18.81■□□□□ 0.6
COL5A2P05997 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.81■□□□□ 0.6
COL5A2P05997 AC026336.4-201ENST00000624565 1050 ntBASIC18.81■□□□□ 0.6
COL5A2P05997 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL5A2P05997 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL5A2P05997 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL5A2P05997 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
COL5A2P05997 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.8■□□□□ 0.6
COL5A2P05997 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.8■□□□□ 0.6
COL5A2P05997 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL5A2P05997 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 PGAM1P11-201ENST00000416729 680 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.8■□□□□ 0.6
COL5A2P05997 AC092903.1-201ENST00000466506 262 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.8■□□□□ 0.6
COL5A2P05997 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC18.8■□□□□ 0.6
COL5A2P05997 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC18.8■□□□□ 0.6
COL5A2P05997 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.8■□□□□ 0.6
COL5A2P05997 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.8■□□□□ 0.6
COL5A2P05997 AL590235.1-201ENST00000564650 861 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 PTPN20CP-201ENST00000614090 920 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 MIR6816-201ENST00000620368 66 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 AC005274.1-201ENST00000623460 802 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COL5A2P05997 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.8■□□□□ 0.6
COL5A2P05997 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.8■□□□□ 0.6
COL5A2P05997 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL5A2P05997 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.8■□□□□ 0.6
COL5A2P05997 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.79■□□□□ 0.6
COL5A2P05997 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL5A2P05997 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL5A2P05997 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
COL5A2P05997 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL5A2P05997 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL5A2P05997 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms