Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
APOBP04114 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 PGR-210ENST00000619228 3038 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC8.83□□□□□ -1
APOBP04114 OLA1P2-201ENST00000395519 1264 ntBASIC8.83□□□□□ -1
APOBP04114 AP000354.1-201ENST00000396982 456 ntBASIC8.83□□□□□ -1
APOBP04114 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC8.83□□□□□ -1
APOBP04114 HNRNPA1P21-201ENST00000424115 961 ntBASIC8.83□□□□□ -1
APOBP04114 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 RNA5SP420-201ENST00000516997 137 ntBASIC8.83□□□□□ -1
APOBP04114 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 BOLA3P2-201ENST00000586496 323 ntBASIC8.83□□□□□ -1
APOBP04114 AP005264.5-201ENST00000590066 467 ntBASIC8.83□□□□□ -1
APOBP04114 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 LINC00554-201ENST00000564841 3011 ntBASIC8.83□□□□□ -1
APOBP04114 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
APOBP04114 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
APOBP04114 KRT18P33-201ENST00000398525 1043 ntBASIC8.83□□□□□ -1
APOBP04114 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 MARK2P17-201ENST00000498560 841 ntBASIC8.83□□□□□ -1
APOBP04114 AC022447.5-201ENST00000504817 392 ntBASIC8.83□□□□□ -1
APOBP04114 TMA16-204ENST00000508268 608 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 AP000920.1-201ENST00000531824 344 ntBASIC8.83□□□□□ -1
APOBP04114 SKA2-205ENST00000580541 689 ntTSL 3 BASIC8.83□□□□□ -1
APOBP04114 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC8.83□□□□□ -1
APOBP04114 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
APOBP04114 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
APOBP04114 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC8.83□□□□□ -1
APOBP04114 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 AC011431.1-201ENST00000512971 230 ntBASIC8.83□□□□□ -1
APOBP04114 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 CLPP-205ENST00000596605 646 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 AC020922.4-201ENST00000621389 339 ntBASIC8.83□□□□□ -1
APOBP04114 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC8.83□□□□□ -1
APOBP04114 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC8.83□□□□□ -1
APOBP04114 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC8.83□□□□□ -1
APOBP04114 AC015688.4-201ENST00000580780 1647 ntBASIC8.83□□□□□ -1
APOBP04114 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC8.82□□□□□ -1
APOBP04114 MPV17-209ENST00000405983 859 ntTSL 5 BASIC8.82□□□□□ -1
APOBP04114 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC8.82□□□□□ -1
APOBP04114 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
APOBP04114 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
APOBP04114 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.82□□□□□ -1
APOBP04114 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 AC015909.5-201ENST00000624336 2266 ntBASIC8.82□□□□□ -1
APOBP04114 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.82□□□□□ -1
APOBP04114 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
APOBP04114 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 HMGA1P2-201ENST00000430198 324 ntBASIC8.82□□□□□ -1
APOBP04114 NALT1-202ENST00000450304 437 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC8.82□□□□□ -1
APOBP04114 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
APOBP04114 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms