Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 KRT8P4-201ENST00000509735 1454 ntBASIC13.16□□□□□ -0.3
TRAF3IP2O43734 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF3IP2O43734 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 SNX18-202ENST00000343017 3140 ntBASIC13.15□□□□□ -0.3
TRAF3IP2O43734 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 CHMP1AP1-201ENST00000445563 662 ntBASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AL355994.2-201ENST00000447882 704 ntBASIC13.15□□□□□ -0.3
TRAF3IP2O43734 GPR53P-205ENST00000457298 1084 ntBASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AC104989.1-201ENST00000519711 778 ntBASIC13.15□□□□□ -0.3
TRAF3IP2O43734 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF3IP2O43734 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
TRAF3IP2O43734 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC215219.1-201ENST00000400706 1817 ntBASIC13.14□□□□□ -0.31
TRAF3IP2O43734 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 HILS1-202ENST00000545329 423 ntBASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AP006547.1-201ENST00000563435 692 ntBASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms